Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AL391422.3-201ENST00000603791 2761 ntBASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 DUSP5P2-201ENST00000426873 1033 ntBASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 AL589935.2-201ENST00000616471 1231 ntBASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB13Q9Y5F0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 ID1-201ENST00000376105 1233 ntBASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 HLA-L-209ENST00000420110 1011 ntBASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 AC073210.2-201ENST00000430369 194 ntBASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 AL138781.1-201ENST00000566567 1274 ntBASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB13Q9Y5F0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 AC091874.3-201ENST00000512672 1195 ntBASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 AC142086.2-201ENST00000569753 217 ntBASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB13Q9Y5F0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 AC097658.1-201ENST00000475555 843 ntBASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 AC133041.1-202ENST00000642053 222 ntBASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB13Q9Y5F0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHB13Q9Y5F0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms