Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTCBQ9Y3I0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC25.52■■□□□ 1.68
RTCBQ9Y3I0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 HLA-G-202ENST00000376815 851 ntBASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 HLA-G-203ENST00000376818 1127 ntBASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTCBQ9Y3I0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.5■■□□□ 1.67
RTCBQ9Y3I0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 AC087388.1-201ENST00000571370 1112 ntBASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCBQ9Y3I0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCBQ9Y3I0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.47■■□□□ 1.67
RTCBQ9Y3I0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms