Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKAP1Q9Y2A7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 AC233702.5-201ENST00000584107 538 ntBASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 AL121829.2-201ENST00000620908 328 ntBASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKAP1Q9Y2A7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 HLA-G-202ENST00000376815 851 ntBASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 HLA-G-203ENST00000376818 1127 ntBASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 KRT17P2-201ENST00000300992 1314 ntBASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKAP1Q9Y2A7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.17■□□□□ 0.82
NCKAP1Q9Y2A7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NCKAP1Q9Y2A7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 RARRES2P10-201ENST00000564312 460 ntBASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NCKAP1Q9Y2A7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms