Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMP2BQ9UQN3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 BX119927.1-201ENST00000636596 1552 ntBASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 KRT19P1-201ENST00000405746 1186 ntBASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 AC087289.5-201ENST00000586076 3175 ntBASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHMP2BQ9UQN3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP2BQ9UQN3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 MYCNOS-205ENST00000641950 531 ntBASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP2BQ9UQN3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP2BQ9UQN3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHMP2BQ9UQN3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms