Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 AC123595.1-201ENST00000440769 1046 ntBASIC17.9■□□□□ 0.46
COPS3Q9UNS2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
COPS3Q9UNS2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPS3Q9UNS2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 AC026471.1-201ENST00000564629 3026 ntBASIC17.88■□□□□ 0.45
COPS3Q9UNS2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 AC019069.1-201ENST00000610008 1333 ntBASIC17.88■□□□□ 0.45
COPS3Q9UNS2 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPS3Q9UNS2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 BX119927.1-201ENST00000636596 1552 ntBASIC17.87■□□□□ 0.45
COPS3Q9UNS2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 YBX1P1-201ENST00000445822 960 ntBASIC17.87■□□□□ 0.45
COPS3Q9UNS2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 KRT18P14-201ENST00000534205 1250 ntBASIC17.87■□□□□ 0.45
COPS3Q9UNS2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COPS3Q9UNS2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 SLC7A5P1-201ENST00000568957 537 ntBASIC17.86■□□□□ 0.45
COPS3Q9UNS2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.86■□□□□ 0.45
COPS3Q9UNS2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms