Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA4Q9UN74 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 HLA-B-256ENST00000639848 1089 ntBASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA4Q9UN74 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 KRT8P20-201ENST00000423953 1409 ntBASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 AC099778.1-201ENST00000568593 1911 ntBASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA4Q9UN74 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23■■□□□ 1.27
PCDHA4Q9UN74 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA4Q9UN74 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 AL391422.3-201ENST00000603791 2761 ntBASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 BX119927.1-201ENST00000636596 1552 ntBASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 AC060766.5-201ENST00000590539 871 ntBASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA4Q9UN74 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 AC092368.3-202ENST00000574180 1591 ntBASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 HLA-G-202ENST00000376815 851 ntBASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 HLA-G-203ENST00000376818 1127 ntBASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 AC005829.2-201ENST00000571422 1056 ntBASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA4Q9UN74 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA4Q9UN74 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms