Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CDC42SE1Q9NRR8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CDC42SE1Q9NRR8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE1Q9NRR8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE1Q9NRR8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.4□□□□□ -0.75
CDC42SE1Q9NRR8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE1Q9NRR8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CDC42SE1Q9NRR8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CDC42SE1Q9NRR8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 PCDHA12-202ENST00000613593 2588 ntBASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CDC42SE1Q9NRR8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms