Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TLR9Q9NR96 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
TLR9Q9NR96 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
TLR9Q9NR96 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.43■■□□□ 1.02
TLR9Q9NR96 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TLR9Q9NR96 AC145285.6-201ENST00000604632 637 ntBASIC21.43■■□□□ 1.02
TLR9Q9NR96 AC004264.1-201ENST00000608354 794 ntBASIC21.43■■□□□ 1.02
TLR9Q9NR96 MIR6786-201ENST00000616843 113 ntBASIC21.43■■□□□ 1.02
TLR9Q9NR96 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TLR9Q9NR96 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TLR9Q9NR96 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TLR9Q9NR96 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TLR9Q9NR96 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TLR9Q9NR96 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TLR9Q9NR96 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 RBM17P1-201ENST00000453646 1190 ntBASIC21.42■■□□□ 1.02
TLR9Q9NR96 KRT18P35-201ENST00000510488 1269 ntBASIC21.42■■□□□ 1.02
TLR9Q9NR96 NUDT16P1-203ENST00000513809 620 ntBASIC21.42■■□□□ 1.02
TLR9Q9NR96 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.42■■□□□ 1.02
TLR9Q9NR96 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 AC092865.7-201ENST00000641832 219 ntBASIC21.41■■□□□ 1.02
TLR9Q9NR96 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.41■■□□□ 1.02
TLR9Q9NR96 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TLR9Q9NR96 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 KRT8P36-201ENST00000489121 1440 ntBASIC21.4■■□□□ 1.02
TLR9Q9NR96 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 UNC93B2-201ENST00000285383 730 ntBASIC21.4■■□□□ 1.02
TLR9Q9NR96 ARMC10P1-201ENST00000313754 855 ntBASIC21.4■■□□□ 1.02
TLR9Q9NR96 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 AP002982.1-201ENST00000492365 877 ntBASIC21.4■■□□□ 1.02
TLR9Q9NR96 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 AC005363.2-201ENST00000618631 242 ntBASIC21.4■■□□□ 1.02
TLR9Q9NR96 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TLR9Q9NR96 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TLR9Q9NR96 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TLR9Q9NR96 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
TLR9Q9NR96 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 AC027702.1-201ENST00000563810 1770 ntBASIC21.39■■□□□ 1.01
TLR9Q9NR96 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.39■■□□□ 1.01
TLR9Q9NR96 AL049597.2-201ENST00000565575 961 ntBASIC21.39■■□□□ 1.01
TLR9Q9NR96 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.39■■□□□ 1.01
TLR9Q9NR96 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 REXO1L10P-201ENST00000615707 1290 ntBASIC21.39■■□□□ 1.01
TLR9Q9NR96 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 AC079598.2-202ENST00000546624 1451 ntBASIC21.39■■□□□ 1.01
TLR9Q9NR96 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TLR9Q9NR96 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TLR9Q9NR96 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TLR9Q9NR96 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms