Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF4Q9NR80 AC020907.5-201ENST00000624372 1936 ntBASIC21.08■□□□□ 0.96
ARHGEF4Q9NR80 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
ARHGEF4Q9NR80 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF4Q9NR80 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 PNMA6B-201ENST00000538162 1200 ntBASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 AC092368.3-202ENST00000574180 1591 ntBASIC21.06■□□□□ 0.96
ARHGEF4Q9NR80 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 AC008403.3-201ENST00000598924 454 ntBASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF4Q9NR80 KRT8P36-201ENST00000489121 1440 ntBASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 AC105020.6-201ENST00000621523 1217 ntBASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 AC087633.2-202ENST00000565166 1439 ntBASIC21.04■□□□□ 0.96
ARHGEF4Q9NR80 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.03■□□□□ 0.96
ARHGEF4Q9NR80 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms