Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 FSCN1P1-201ENST00000568912 1481 ntBASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZFYVE28Q9HCC9 AC011484.1-201ENST00000377652 1995 ntBASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 KRT8P36-201ENST00000489121 1440 ntBASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 LINC01238-205ENST00000567549 1107 ntBASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZFYVE28Q9HCC9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 AK4P3-201ENST00000418260 669 ntBASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 ECEL1P2-202ENST00000465689 757 ntBASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 AC027702.1-201ENST00000563810 1770 ntBASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZFYVE28Q9HCC9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 TSPY14P-201ENST00000303979 915 ntBASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 HLA-G-202ENST00000376815 851 ntBASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 HLA-G-203ENST00000376818 1127 ntBASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 BX664615.1-201ENST00000443558 458 ntBASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 AP005242.2-201ENST00000580065 1175 ntBASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
ZFYVE28Q9HCC9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ZFYVE28Q9HCC9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 AC128688.1-201ENST00000487626 519 ntBASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 AL358472.4-201ENST00000633140 710 ntBASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ZFYVE28Q9HCC9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.06■■□□□ 1.28
ZFYVE28Q9HCC9 AC022616.7-201ENST00000525383 220 ntBASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms