Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 POU5F1P4-201ENST00000413175 1085 ntBASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 AC060766.5-201ENST00000590539 871 ntBASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
SCAF1Q9H7N4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 AC012618.2-201ENST00000428058 849 ntBASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 AC012306.2-201ENST00000609350 630 ntBASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.83■■■□□ 2.37
SCAF1Q9H7N4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
SCAF1Q9H7N4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 AC233702.5-201ENST00000584107 538 ntBASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC29.82■■■□□ 2.36
SCAF1Q9H7N4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SCAF1Q9H7N4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 RPS2P55-201ENST00000397318 883 ntBASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 AC107956.1-201ENST00000494359 873 ntBASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SCAF1Q9H7N4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 FEM1AP1-201ENST00000431297 1995 ntBASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SCAF1Q9H7N4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 FEM1AP4-201ENST00000443167 1987 ntBASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.78■■■□□ 2.36
SCAF1Q9H7N4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC29.77■■■□□ 2.36
SCAF1Q9H7N4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms