Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D4AQ9H788 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 AC233702.5-201ENST00000584107 538 ntBASIC23.51■■□□□ 1.35
SH2D4AQ9H788 AP001412.1-201ENST00000608405 714 ntBASIC23.51■■□□□ 1.35
SH2D4AQ9H788 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.51■■□□□ 1.35
SH2D4AQ9H788 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 HLA-G-202ENST00000376815 851 ntBASIC23.5■■□□□ 1.35
SH2D4AQ9H788 HLA-G-203ENST00000376818 1127 ntBASIC23.5■■□□□ 1.35
SH2D4AQ9H788 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SH2D4AQ9H788 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 RPS2P55-201ENST00000397318 883 ntBASIC23.49■■□□□ 1.35
SH2D4AQ9H788 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 AC107956.1-201ENST00000494359 873 ntBASIC23.49■■□□□ 1.35
SH2D4AQ9H788 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
SH2D4AQ9H788 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 SNORA78-201ENST00000459373 127 ntBASIC23.48■■□□□ 1.35
SH2D4AQ9H788 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D4AQ9H788 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 AL121906.2-201ENST00000621597 723 ntBASIC23.47■■□□□ 1.35
SH2D4AQ9H788 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D4AQ9H788 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 RARRES2P10-201ENST00000564312 460 ntBASIC23.46■■□□□ 1.35
SH2D4AQ9H788 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D4AQ9H788 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms