Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX6-2Q9C056 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 AC099398.1-201ENST00000567919 2776 ntBASIC16.26■□□□□ 0.19
NKX6-2Q9C056 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX6-2Q9C056 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 AC010980.1-201ENST00000587192 1142 ntBASIC16.25■□□□□ 0.19
NKX6-2Q9C056 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NKX6-2Q9C056 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 PRORSD1P-202ENST00000563365 2154 ntBASIC16.24■□□□□ 0.19
NKX6-2Q9C056 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NKX6-2Q9C056 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms