Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 AC004870.1-201ENST00000315132 882 ntBASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 YBX1P2-201ENST00000489612 999 ntBASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 CR392000.1-201ENST00000624770 1228 ntBASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 TSPY14P-201ENST00000303979 915 ntBASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 AC116407.4-201ENST00000623319 1061 ntBASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNTNAP3Q9BZ76 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 FAM87A-204ENST00000613235 858 ntBASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 AC005332.1-201ENST00000577698 1310 ntBASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.2■□□□□ 0.66
CNTNAP3Q9BZ76 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 AC004264.1-201ENST00000608354 794 ntBASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP3Q9BZ76 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 AC007322.3-201ENST00000426526 701 ntBASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP3Q9BZ76 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3Q9BZ76 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms