Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AF213884.3-201ENST00000563833 479 ntBASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AL354811.1-201ENST00000610286 706 ntBASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AL355001.2-201ENST00000620617 1191 ntBASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
KRTAP3-1Q9BYR8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MTND2P7-201ENST00000521337 640 ntBASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 AKR1B10P2-201ENST00000577332 927 ntBASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
KRTAP3-1Q9BYR8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 NEFHP1-201ENST00000412845 2629 ntBASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 IRS3P-201ENST00000223076 1006 ntBASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 AC091305.1-201ENST00000479476 895 ntBASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 AC120498.10-201ENST00000621827 505 ntBASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 MIR6084-201ENST00000622012 110 ntBASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
KRTAP3-1Q9BYR8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms