Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AP001160.3-201ENST00000601484 763 ntBASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AC104187.1-201ENST00000607510 612 ntBASIC11.94□□□□□ -0.5
LIMD2Q9BT23 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.94□□□□□ -0.5
LIMD2Q9BT23 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 PALM-207ENST00000590161 2137 ntTSL 4 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 PKD1P5-201ENST00000532415 10291 ntBASIC11.93□□□□□ -0.5
LIMD2Q9BT23 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LIMD2Q9BT23 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
LIMD2Q9BT23 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LIMD2Q9BT23 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC11.91□□□□□ -0.5
LIMD2Q9BT23 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LIMD2Q9BT23 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LIMD2Q9BT23 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LIMD2Q9BT23 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms