Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 LINC01006-201ENST00000333319 2292 ntBASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 HLA-B-256ENST00000639848 1089 ntBASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 AC092667.1-201ENST00000434301 2586 ntBASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCM2Q9BSQ5 SMG8-203ENST00000578922 2178 ntBASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 PTBP1P-201ENST00000554374 1601 ntBASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCM2Q9BSQ5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 AC023632.3-201ENST00000521633 145 ntBASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 CD99P1-205ENST00000527459 561 ntBASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCM2Q9BSQ5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCM2Q9BSQ5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.77■□□□□ 0.75
CCM2Q9BSQ5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCM2Q9BSQ5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCM2Q9BSQ5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 AC060766.5-201ENST00000590539 871 ntBASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCM2Q9BSQ5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 AC092368.3-202ENST00000574180 1591 ntBASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 AL512408.1-201ENST00000569378 2000 ntBASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 LINC01521-201ENST00000504184 1943 ntBASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.75■□□□□ 0.75
CCM2Q9BSQ5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms