Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CYP2D8P-201ENST00000433633 1490 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 Z98882.1-201ENST00000622160 2253 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 NIFKP9-201ENST00000419265 221 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 SLC25A3P1-201ENST00000443844 931 ntBASIC19.74■□□□□ 0.75
PCDH15Q96QU1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH15Q96QU1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 AC010947.1-201ENST00000623454 693 ntBASIC19.73■□□□□ 0.75
PCDH15Q96QU1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH15Q96QU1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 LINC01568-207ENST00000641790 1380 ntBASIC19.72■□□□□ 0.75
PCDH15Q96QU1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 ARMC10P1-201ENST00000313754 855 ntBASIC19.72■□□□□ 0.75
PCDH15Q96QU1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH15Q96QU1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 KRT16P1-201ENST00000399124 1418 ntBASIC19.71■□□□□ 0.75
PCDH15Q96QU1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 MIR1238-201ENST00000408483 83 ntBASIC19.71■□□□□ 0.75
PCDH15Q96QU1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDH15Q96QU1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 KRT8P36-201ENST00000489121 1440 ntBASIC19.7■□□□□ 0.74
PCDH15Q96QU1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDH15Q96QU1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms