Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL845331.1-201ENST00000424978 1190 ntBASIC19.86■□□□□ 0.77
CFAP54Q96N23 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CFAP54Q96N23 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.85■□□□□ 0.77
CFAP54Q96N23 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CFAP54Q96N23 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.85■□□□□ 0.77
CFAP54Q96N23 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CFAP54Q96N23 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 C2orf69P3-201ENST00000565542 1120 ntBASIC19.84■□□□□ 0.77
CFAP54Q96N23 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CFAP54Q96N23 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.84■□□□□ 0.77
CFAP54Q96N23 AC092647.4-201ENST00000457211 535 ntBASIC19.84■□□□□ 0.77
CFAP54Q96N23 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CFAP54Q96N23 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.83■□□□□ 0.77
CFAP54Q96N23 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CFAP54Q96N23 AL390719.1-204ENST00000412397 1219 ntBASIC19.83■□□□□ 0.77
CFAP54Q96N23 PGM5P4-201ENST00000421970 445 ntBASIC19.83■□□□□ 0.77
CFAP54Q96N23 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CFAP54Q96N23 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CFAP54Q96N23 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CFAP54Q96N23 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CFAP54Q96N23 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.83■□□□□ 0.76
CFAP54Q96N23 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.83■□□□□ 0.76
CFAP54Q96N23 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.83■□□□□ 0.76
CFAP54Q96N23 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 CYP21A1P-202ENST00000354927 1481 ntBASIC19.83■□□□□ 0.76
CFAP54Q96N23 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CFAP54Q96N23 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.83■□□□□ 0.76
CFAP54Q96N23 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CFAP54Q96N23 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 AC007322.3-201ENST00000426526 701 ntBASIC19.82■□□□□ 0.76
CFAP54Q96N23 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 AL359075.1-203ENST00000462729 1002 ntBASIC19.82■□□□□ 0.76
CFAP54Q96N23 AC092183.1-201ENST00000469884 875 ntBASIC19.82■□□□□ 0.76
CFAP54Q96N23 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 AC009078.2-202ENST00000463353 338 ntBASIC19.82■□□□□ 0.76
CFAP54Q96N23 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.82■□□□□ 0.76
CFAP54Q96N23 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CFAP54Q96N23 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.81■□□□□ 0.76
CFAP54Q96N23 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CFAP54Q96N23 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms