Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf72Q96LT7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf72Q96LT7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf72Q96LT7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 AC104187.1-201ENST00000607510 612 ntBASIC20.65■□□□□ 0.9
C9orf72Q96LT7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.65■□□□□ 0.9
C9orf72Q96LT7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
C9orf72Q96LT7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 KRT18P11-201ENST00000435214 1283 ntBASIC20.64■□□□□ 0.89
C9orf72Q96LT7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 AC010141.2-201ENST00000452426 721 ntBASIC20.64■□□□□ 0.89
C9orf72Q96LT7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 SLC7A5P2-201ENST00000553010 536 ntBASIC20.64■□□□□ 0.89
C9orf72Q96LT7 AC120498.10-201ENST00000621827 505 ntBASIC20.64■□□□□ 0.89
C9orf72Q96LT7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 AC073111.5-205ENST00000641717 521 ntBASIC20.64■□□□□ 0.89
C9orf72Q96LT7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C9orf72Q96LT7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 CDCA4P2-201ENST00000441182 718 ntBASIC20.63■□□□□ 0.89
C9orf72Q96LT7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
C9orf72Q96LT7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms