Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.88■■□□□ 1.09
LRCH3Q96II8 RNF152P1-201ENST00000397754 604 ntBASIC21.88■■□□□ 1.09
LRCH3Q96II8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH3Q96II8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.88■■□□□ 1.09
LRCH3Q96II8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.88■■□□□ 1.09
LRCH3Q96II8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.88■■□□□ 1.09
LRCH3Q96II8 AC003102.1-202ENST00000563394 1796 ntBASIC21.88■■□□□ 1.09
LRCH3Q96II8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH3Q96II8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH3Q96II8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRCH3Q96II8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH3Q96II8 C11orf96-202ENST00000528572 1834 ntBASIC21.87■■□□□ 1.09
LRCH3Q96II8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH3Q96II8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 INGX-201ENST00000359239 846 ntBASIC21.87■■□□□ 1.09
LRCH3Q96II8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 FDX1P1-201ENST00000449115 551 ntBASIC21.87■■□□□ 1.09
LRCH3Q96II8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH3Q96II8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
LRCH3Q96II8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH3Q96II8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRCH3Q96II8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 FAM207BP-201ENST00000447172 505 ntBASIC21.86■■□□□ 1.09
LRCH3Q96II8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 EGLN1P1-201ENST00000531623 762 ntBASIC21.86■■□□□ 1.09
LRCH3Q96II8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRCH3Q96II8 C1orf229-201ENST00000623686 2258 ntBASIC21.86■■□□□ 1.09
LRCH3Q96II8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRCH3Q96II8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 FAM87A-204ENST00000613235 858 ntBASIC21.85■■□□□ 1.09
LRCH3Q96II8 AL121956.5-201ENST00000625261 221 ntBASIC21.85■■□□□ 1.09
LRCH3Q96II8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRCH3Q96II8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRCH3Q96II8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 TSPY14P-201ENST00000303979 915 ntBASIC21.84■■□□□ 1.09
LRCH3Q96II8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRCH3Q96II8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 AC092647.4-201ENST00000457211 535 ntBASIC21.84■■□□□ 1.09
LRCH3Q96II8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.84■■□□□ 1.09
LRCH3Q96II8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.83■■□□□ 1.09
LRCH3Q96II8 AC124283.5-201ENST00000624661 1809 ntBASIC21.83■■□□□ 1.09
LRCH3Q96II8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.83■■□□□ 1.09
LRCH3Q96II8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH3Q96II8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.83■■□□□ 1.09
LRCH3Q96II8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.83■■□□□ 1.09
LRCH3Q96II8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LRCH3Q96II8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.83■■□□□ 1.08
LRCH3Q96II8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms