Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22■■□□□ 1.11
TRIM43Q96BQ3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22■■□□□ 1.11
TRIM43Q96BQ3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22■■□□□ 1.11
TRIM43Q96BQ3 AC022616.7-201ENST00000525383 220 ntBASIC22■■□□□ 1.11
TRIM43Q96BQ3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22■■□□□ 1.11
TRIM43Q96BQ3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM43Q96BQ3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 TSPY14P-201ENST00000303979 915 ntBASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 AC063952.2-201ENST00000498792 1227 ntBASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 EGLN1P1-201ENST00000531623 762 ntBASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 C2orf69P3-201ENST00000565542 1120 ntBASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM43Q96BQ3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 INGX-201ENST00000359239 846 ntBASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 TPM4P1-201ENST00000436100 807 ntBASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM43Q96BQ3 KRT8P36-201ENST00000489121 1440 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 BX664615.1-201ENST00000443558 458 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 KRT18P56-201ENST00000507275 550 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 KRT126P-201ENST00000549467 1181 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 AL031985.4-201ENST00000642138 673 ntBASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM43Q96BQ3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 CRYGFP-201ENST00000418459 633 ntBASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 AP005242.2-201ENST00000580065 1175 ntBASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 FAM87A-204ENST00000613235 858 ntBASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 FSCN1P1-201ENST00000568912 1481 ntBASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 AC011484.1-201ENST00000377652 1995 ntBASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TRIM43Q96BQ3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 MYC-208ENST00000641036 567 ntBASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms