Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
U2AF1L4Q8WU68 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.04■■□□□ 1.28
U2AF1L4Q8WU68 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
U2AF1L4Q8WU68 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 AC113347.1-201ENST00000413321 391 ntBASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
U2AF1L4Q8WU68 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
U2AF1L4Q8WU68 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.27
U2AF1L4Q8WU68 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 KRT8P9-201ENST00000558927 1449 ntBASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 AC087633.2-202ENST00000565166 1439 ntBASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 AC244015.2-201ENST00000616358 1861 ntBASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 AL390719.1-204ENST00000412397 1219 ntBASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 HTR7P1-201ENST00000538670 1336 ntBASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
U2AF1L4Q8WU68 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 AC026471.6-201ENST00000622954 1905 ntBASIC23■■□□□ 1.27
U2AF1L4Q8WU68 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 RER1-204ENST00000378518 522 ntTSL 3 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
U2AF1L4Q8WU68 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 FAM197Y1-201ENST00000421178 764 ntBASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 RBM17P1-201ENST00000453646 1190 ntBASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.99■■□□□ 1.27
U2AF1L4Q8WU68 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
U2AF1L4Q8WU68 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.98■■□□□ 1.27
U2AF1L4Q8WU68 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
U2AF1L4Q8WU68 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
U2AF1L4Q8WU68 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
U2AF1L4Q8WU68 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms