Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF139Q8WU17 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RNF139Q8WU17 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF139Q8WU17 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 PNMA6B-201ENST00000538162 1200 ntBASIC21.1■□□□□ 0.97
RNF139Q8WU17 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF139Q8WU17 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
RNF139Q8WU17 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF139Q8WU17 AIRN-201ENST00000601203 4374 ntBASIC21.1■□□□□ 0.97
RNF139Q8WU17 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 MIR4651-201ENST00000582622 73 ntBASIC21.09■□□□□ 0.97
RNF139Q8WU17 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 GABARAPL3-202ENST00000624044 1851 ntBASIC21.09■□□□□ 0.97
RNF139Q8WU17 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF139Q8WU17 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF139Q8WU17 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF139Q8WU17 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF139Q8WU17 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 AC020907.5-201ENST00000624372 1936 ntBASIC21.08■□□□□ 0.97
RNF139Q8WU17 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF139Q8WU17 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RNF139Q8WU17 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 TSPY20P-201ENST00000450910 630 ntBASIC21.08■□□□□ 0.97
RNF139Q8WU17 FAM201B-201ENST00000458407 597 ntBASIC21.08■□□□□ 0.97
RNF139Q8WU17 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF139Q8WU17 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF139Q8WU17 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF139Q8WU17 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF139Q8WU17 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms