Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH19Q8TAB3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 BX119927.1-201ENST00000636596 1552 ntBASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDH19Q8TAB3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 AF201337.1-201ENST00000520239 748 ntBASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 AL121832.2-201ENST00000610979 668 ntBASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 AL589743.5-201ENST00000616611 1050 ntBASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH19Q8TAB3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 AC105036.2-201ENST00000569468 176 ntBASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH19Q8TAB3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
PCDH19Q8TAB3 AL691432.2-201ENST00000607222 2038 ntBASIC20.77■□□□□ 0.91
PCDH19Q8TAB3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 AC083906.2-201ENST00000511578 360 ntBASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDH19Q8TAB3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 MKRN4P-201ENST00000444706 1521 ntBASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH19Q8TAB3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms