Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 FBXW4P1-201ENST00000426721 2239 ntBASIC15.72■□□□□ 0.11
LINC01006Q8NI28 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 RCN1P1-201ENST00000400413 996 ntBASIC15.72■□□□□ 0.11
LINC01006Q8NI28 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC01006Q8NI28 AL049796.1-201ENST00000565336 1766 ntBASIC15.72■□□□□ 0.11
LINC01006Q8NI28 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 AL024507.2-201ENST00000606070 2574 ntBASIC15.71■□□□□ 0.11
LINC01006Q8NI28 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 AP002982.1-201ENST00000492365 877 ntBASIC15.71■□□□□ 0.11
LINC01006Q8NI28 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC01006Q8NI28 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01006Q8NI28 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01006Q8NI28 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC01006Q8NI28 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC01006Q8NI28 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 AL117328.2-201ENST00000624617 1940 ntBASIC15.69■□□□□ 0.1
LINC01006Q8NI28 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 NUDT16P1-203ENST00000513809 620 ntBASIC15.69■□□□□ 0.1
LINC01006Q8NI28 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC01006Q8NI28 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms