Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC092368.3-202ENST00000574180 1591 ntBASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 AL158047.1-201ENST00000445918 881 ntBASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 PNMA6B-201ENST00000538162 1200 ntBASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDND2Q8NHS1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 AC142381.4-202ENST00000563973 229 ntBASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 AC008403.3-201ENST00000598924 454 ntBASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDND2Q8NHS1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDND2Q8NHS1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 AC087633.2-202ENST00000565166 1439 ntBASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 UNC93B4-201ENST00000505679 747 ntBASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDND2Q8NHS1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDND2Q8NHS1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms