Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC16Q8NEE8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 AL390719.1-204ENST00000412397 1219 ntBASIC21.1■□□□□ 0.97
TTC16Q8NEE8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
TTC16Q8NEE8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 AL596275.1-201ENST00000423464 877 ntBASIC21.09■□□□□ 0.97
TTC16Q8NEE8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC16Q8NEE8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 POM121L13P-201ENST00000422362 380 ntBASIC21.08■□□□□ 0.97
TTC16Q8NEE8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 UBE2SP1-201ENST00000450587 669 ntBASIC21.08■□□□□ 0.97
TTC16Q8NEE8 AC008550.1-201ENST00000511500 884 ntBASIC21.08■□□□□ 0.97
TTC16Q8NEE8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC16Q8NEE8 AC121338.2-201ENST00000622535 1744 ntBASIC21.08■□□□□ 0.97
TTC16Q8NEE8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
TTC16Q8NEE8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 RN7SL471P-201ENST00000580476 299 ntBASIC21.07■□□□□ 0.96
TTC16Q8NEE8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC16Q8NEE8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms