Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC17A8Q8NDX2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.61■■□□□ 1.21
SLC17A8Q8NDX2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 NTF6B-201ENST00000591913 560 ntBASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 AL137060.1-201ENST00000618151 2648 ntBASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLC17A8Q8NDX2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 MCRIP2P1-201ENST00000394346 511 ntBASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLC17A8Q8NDX2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 AC005363.2-201ENST00000618631 242 ntBASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SLC17A8Q8NDX2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC17A8Q8NDX2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 GPALPP1-207ENST00000611650 899 ntBASIC22.57■■□□□ 1.2
SLC17A8Q8NDX2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms