Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSMEM1Q8N8F7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LSMEM1Q8N8F7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSMEM1Q8N8F7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
LSMEM1Q8N8F7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
LSMEM1Q8N8F7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 AC022517.1-201ENST00000592429 346 ntBASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 AC069236.1-201ENST00000604339 616 ntBASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
LSMEM1Q8N8F7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 AC007322.1-201ENST00000426983 750 ntBASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSMEM1Q8N8F7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms