Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39CQ8N584 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.39■■□□□ 1.02
TTC39CQ8N584 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TTC39CQ8N584 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
TTC39CQ8N584 KRT16P6-202ENST00000425692 1426 ntBASIC21.39■■□□□ 1.02
TTC39CQ8N584 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39CQ8N584 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39CQ8N584 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39CQ8N584 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 PNMA6B-201ENST00000538162 1200 ntBASIC21.39■■□□□ 1.01
TTC39CQ8N584 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39CQ8N584 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TTC39CQ8N584 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TTC39CQ8N584 SMG8-203ENST00000578922 2178 ntBASIC21.38■■□□□ 1.01
TTC39CQ8N584 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39CQ8N584 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39CQ8N584 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39CQ8N584 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39CQ8N584 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 LINC01006-201ENST00000333319 2292 ntBASIC21.38■■□□□ 1.01
TTC39CQ8N584 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 KRT18P6-201ENST00000555540 1265 ntBASIC21.38■■□□□ 1.01
TTC39CQ8N584 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.38■■□□□ 1.01
TTC39CQ8N584 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TTC39CQ8N584 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 AL512408.1-201ENST00000569378 2000 ntBASIC21.37■■□□□ 1.01
TTC39CQ8N584 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.37■■□□□ 1.01
TTC39CQ8N584 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TTC39CQ8N584 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.36■■□□□ 1.01
TTC39CQ8N584 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TTC39CQ8N584 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.36■■□□□ 1.01
TTC39CQ8N584 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.36■■□□□ 1.01
TTC39CQ8N584 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TTC39CQ8N584 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TTC39CQ8N584 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.35■■□□□ 1.01
TTC39CQ8N584 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.35■■□□□ 1.01
TTC39CQ8N584 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TTC39CQ8N584 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms