Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 LINC02228-203ENST00000641970 1355 ntBASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 SUDS3P1-201ENST00000505831 966 ntBASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 SLC7A5P2-201ENST00000553010 536 ntBASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 AC131212.1-201ENST00000613771 668 ntBASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC01561Q8N1V8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 LETM1P2-201ENST00000597330 2178 ntBASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 AC125437.2-201ENST00000625180 2167 ntBASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 AC104187.1-201ENST00000607510 612 ntBASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 AC009237.14-201ENST00000609975 1594 ntBASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LINC01561Q8N1V8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 PCDHAC2-203ENST00000615316 3011 ntBASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
LINC01561Q8N1V8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms