Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 KRT16P2-201ENST00000414673 1423 ntBASIC20■□□□□ 0.79
TRIM42Q8IWZ5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM42Q8IWZ5 AC026471.1-201ENST00000564629 3026 ntBASIC20■□□□□ 0.79
TRIM42Q8IWZ5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 TSPY26P-201ENST00000476365 1326 ntBASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM42Q8IWZ5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 MIR935-201ENST00000401179 91 ntBASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 AC120498.10-201ENST00000621827 505 ntBASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM42Q8IWZ5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM42Q8IWZ5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms