Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AC008403.3-201ENST00000598924 454 ntBASIC19.16■□□□□ 0.66
RAB43Q86YS6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB43Q86YS6 AC087633.2-202ENST00000565166 1439 ntBASIC19.16■□□□□ 0.66
RAB43Q86YS6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
RAB43Q86YS6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 SOX15-203ENST00000570788 1093 ntBASIC19.15■□□□□ 0.66
RAB43Q86YS6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAB43Q86YS6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB43Q86YS6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB43Q86YS6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RAB43Q86YS6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 UBE2SP1-201ENST00000450587 669 ntBASIC19.13■□□□□ 0.65
RAB43Q86YS6 C2orf69P4-201ENST00000565394 541 ntBASIC19.13■□□□□ 0.65
RAB43Q86YS6 FAM197Y4-202ENST00000622692 608 ntBASIC19.13■□□□□ 0.65
RAB43Q86YS6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB43Q86YS6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB43Q86YS6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RAB43Q86YS6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB43Q86YS6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB43Q86YS6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB43Q86YS6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB43Q86YS6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB43Q86YS6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB43Q86YS6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms