Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 SMG8-203ENST00000578922 2178 ntBASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.2■□□□□ 0.82
LYSMD3Q7Z3D4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 AL512408.1-201ENST00000569378 2000 ntBASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD3Q7Z3D4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 PTBP1P-201ENST00000554374 1601 ntBASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD3Q7Z3D4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 KRT18P6-201ENST00000555540 1265 ntBASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD3Q7Z3D4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms