Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SCXQ7RTU7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 POU5F1P3-201ENST00000428824 1078 ntBASIC13.24□□□□□ -0.29
SCXQ7RTU7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SCXQ7RTU7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SCXQ7RTU7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 AC010980.2-201ENST00000587099 1412 ntBASIC13.23□□□□□ -0.29
SCXQ7RTU7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.23□□□□□ -0.29
SCXQ7RTU7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SCXQ7RTU7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC010542.4-201ENST00000563151 1910 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC026471.6-201ENST00000622954 1905 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC245052.3-201ENST00000450182 901 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC097658.1-201ENST00000475555 843 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC083880.1-201ENST00000608266 535 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 AC066615.1-201ENST00000640911 628 ntBASIC13.22□□□□□ -0.29
SCXQ7RTU7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
SCXQ7RTU7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SCXQ7RTU7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SCXQ7RTU7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SCXQ7RTU7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms