Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHFQ7M4L6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHFQ7M4L6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHFQ7M4L6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHFQ7M4L6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHFQ7M4L6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.14■□□□□ 0.49
SHFQ7M4L6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 AC123595.1-201ENST00000440769 1046 ntBASIC18.13■□□□□ 0.49
SHFQ7M4L6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 AP000974.1-201ENST00000623909 2387 ntBASIC18.13■□□□□ 0.49
SHFQ7M4L6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
SHFQ7M4L6 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
SHFQ7M4L6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHFQ7M4L6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 DPP3P2-201ENST00000416030 1696 ntBASIC18.12■□□□□ 0.49
SHFQ7M4L6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 AC116050.2-201ENST00000612102 1779 ntBASIC18.12■□□□□ 0.49
SHFQ7M4L6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 KRT18P20-201ENST00000548986 1279 ntBASIC18.12■□□□□ 0.49
SHFQ7M4L6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHFQ7M4L6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHFQ7M4L6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 AP001160.3-201ENST00000601484 763 ntBASIC18.11■□□□□ 0.49
SHFQ7M4L6 AC104187.1-201ENST00000607510 612 ntBASIC18.11■□□□□ 0.49
SHFQ7M4L6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
SHFQ7M4L6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHFQ7M4L6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHFQ7M4L6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.1■□□□□ 0.49
SHFQ7M4L6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHFQ7M4L6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHFQ7M4L6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms