Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 AC137761.2-201ENST00000561729 223 ntBASIC18.5■□□□□ 0.55
TUBA1AQ71U36 AC145350.3-201ENST00000569033 163 ntBASIC18.5■□□□□ 0.55
TUBA1AQ71U36 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.5■□□□□ 0.55
TUBA1AQ71U36 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 AC004408.2-201ENST00000623613 2777 ntBASIC18.49■□□□□ 0.55
TUBA1AQ71U36 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 KRT19P1-201ENST00000405746 1186 ntBASIC18.49■□□□□ 0.55
TUBA1AQ71U36 EEF1DP3-203ENST00000566025 782 ntBASIC18.49■□□□□ 0.55
TUBA1AQ71U36 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 AP001160.3-201ENST00000601484 763 ntBASIC18.49■□□□□ 0.55
TUBA1AQ71U36 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TUBA1AQ71U36 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TUBA1AQ71U36 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.47■□□□□ 0.55
TUBA1AQ71U36 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 AC016769.1-201ENST00000409132 1010 ntBASIC18.46■□□□□ 0.55
TUBA1AQ71U36 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 AC053503.5-201ENST00000601508 636 ntBASIC18.46■□□□□ 0.55
TUBA1AQ71U36 AC092437.1-201ENST00000624794 1048 ntBASIC18.46■□□□□ 0.55
TUBA1AQ71U36 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBA1AQ71U36 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TUBA1AQ71U36 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms