Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CD109Q6YHK3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CD109Q6YHK3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.89■■■□□ 2.54
CD109Q6YHK3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.89■■■□□ 2.54
CD109Q6YHK3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CD109Q6YHK3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC30.89■■■□□ 2.53
CD109Q6YHK3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.89■■■□□ 2.53
CD109Q6YHK3 AL445675.2-201ENST00000620291 557 ntBASIC30.89■■■□□ 2.53
CD109Q6YHK3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CD109Q6YHK3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC30.88■■■□□ 2.53
CD109Q6YHK3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CD109Q6YHK3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CD109Q6YHK3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
CD109Q6YHK3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CD109Q6YHK3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CD109Q6YHK3 HMGA1P5-201ENST00000412453 271 ntBASIC30.87■■■□□ 2.53
CD109Q6YHK3 YBX1P2-201ENST00000489612 999 ntBASIC30.87■■■□□ 2.53
CD109Q6YHK3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.87■■■□□ 2.53
CD109Q6YHK3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC30.87■■■□□ 2.53
CD109Q6YHK3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.87■■■□□ 2.53
CD109Q6YHK3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CD109Q6YHK3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CD109Q6YHK3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CD109Q6YHK3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CD109Q6YHK3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CD109Q6YHK3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CD109Q6YHK3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC30.85■■■□□ 2.53
CD109Q6YHK3 AC011506.1-201ENST00000474329 610 ntBASIC30.85■■■□□ 2.53
CD109Q6YHK3 FAM86EP-206ENST00000510506 987 ntBASIC30.85■■■□□ 2.53
CD109Q6YHK3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.85■■■□□ 2.53
CD109Q6YHK3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CD109Q6YHK3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
CD109Q6YHK3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CD109Q6YHK3 PCED1CP-201ENST00000419887 785 ntBASIC30.84■■■□□ 2.53
CD109Q6YHK3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 FAM207BP-201ENST00000447172 505 ntBASIC30.84■■■□□ 2.53
CD109Q6YHK3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 AL121956.5-201ENST00000625261 221 ntBASIC30.84■■■□□ 2.53
CD109Q6YHK3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CD109Q6YHK3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CD109Q6YHK3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.84■■■□□ 2.53
CD109Q6YHK3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CD109Q6YHK3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
CD109Q6YHK3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 AC097488.1-201ENST00000507834 756 ntBASIC30.83■■■□□ 2.53
CD109Q6YHK3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CD109Q6YHK3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC30.82■■■□□ 2.53
CD109Q6YHK3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CD109Q6YHK3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CD109Q6YHK3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CD109Q6YHK3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.82■■■□□ 2.52
CD109Q6YHK3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
CD109Q6YHK3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
CD109Q6YHK3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
CD109Q6YHK3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CD109Q6YHK3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CD109Q6YHK3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 TSPY5P-201ENST00000426936 936 ntBASIC30.81■■■□□ 2.52
CD109Q6YHK3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CD109Q6YHK3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
CD109Q6YHK3 KRT8P36-201ENST00000489121 1440 ntBASIC30.81■■■□□ 2.52
CD109Q6YHK3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
CD109Q6YHK3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CD109Q6YHK3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms