Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KRT18P5-201ENST00000436075 1291 ntBASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 KRT18P20-201ENST00000548986 1279 ntBASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TMEM53Q6P2H8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM53Q6P2H8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 AC007613.1-201ENST00000572811 2597 ntBASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 AL162430.1-201ENST00000480705 870 ntBASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEM53Q6P2H8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 AC061975.6-201ENST00000579045 1553 ntBASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM53Q6P2H8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM53Q6P2H8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms