Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 KRT18P38-201ENST00000449496 1282 ntBASIC10.85□□□□□ -0.67
RNF213Q63HN8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 HOMER2P1-201ENST00000455653 964 ntBASIC10.85□□□□□ -0.67
RNF213Q63HN8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 RNA5SP419-201ENST00000515908 135 ntBASIC10.85□□□□□ -0.67
RNF213Q63HN8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RNF213Q63HN8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RNF213Q63HN8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 NUS1P1-201ENST00000446295 882 ntBASIC10.84□□□□□ -0.67
RNF213Q63HN8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC092053.2-201ENST00000640557 1818 ntBASIC10.84□□□□□ -0.67
RNF213Q63HN8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC003102.1-202ENST00000563394 1796 ntBASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RNF213Q63HN8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
RNF213Q63HN8 TSPY19P-201ENST00000418461 509 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 TSPY18P-201ENST00000441642 509 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 AC079781.3-201ENST00000449110 356 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 POLD2P1-201ENST00000511220 997 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 AL136038.3-201ENST00000561909 1096 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 AL121829.2-201ENST00000620908 328 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 FSCN1P1-201ENST00000568912 1481 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 AL139125.2-201ENST00000623134 1869 ntBASIC10.83□□□□□ -0.68
RNF213Q63HN8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC10.83□□□□□ -0.68
RNF213Q63HN8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
RNF213Q63HN8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 IGHV3-22-201ENST00000520721 359 ntBASIC10.82□□□□□ -0.68
RNF213Q63HN8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
RNF213Q63HN8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RNF213Q63HN8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms