Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 RASA4CP-201ENST00000424092 1398 ntBASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 TREX1-205ENST00000625293 1783 ntBASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 EDA-201ENST00000338901 1233 ntBASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 PBX2P1-201ENST00000493219 1291 ntBASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AL354811.1-201ENST00000610286 706 ntBASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00242Q5T6M2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 AC010141.2-201ENST00000452426 721 ntBASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00242Q5T6M2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms