Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LINC01556Q5JQF7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01556Q5JQF7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC01556Q5JQF7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC01556Q5JQF7 AC092368.3-202ENST00000574180 1591 ntBASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 PTBP1P-201ENST00000554374 1601 ntBASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 KRT18P6-201ENST00000555540 1265 ntBASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 AC005829.2-201ENST00000571422 1056 ntBASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LINC01556Q5JQF7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 PNMA6B-201ENST00000538162 1200 ntBASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC01556Q5JQF7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 KRT8P17-201ENST00000453110 1448 ntBASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01556Q5JQF7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms