Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC128688.1-201ENST00000487626 519 ntBASIC35.79■■■■□ 3.32
HMGXB3Q12766 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
HMGXB3Q12766 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC35.79■■■■□ 3.32
HMGXB3Q12766 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC35.79■■■■□ 3.32
HMGXB3Q12766 MFF-203ENST00000349901 1716 ntTSL 2 BASIC35.79■■■■□ 3.32
HMGXB3Q12766 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC35.79■■■■□ 3.32
HMGXB3Q12766 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
HMGXB3Q12766 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
HMGXB3Q12766 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 GRAMD4P8-201ENST00000605465 1115 ntBASIC35.78■■■■□ 3.32
HMGXB3Q12766 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC35.78■■■■□ 3.32
HMGXB3Q12766 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 HMGA1P5-201ENST00000412453 271 ntBASIC35.78■■■■□ 3.32
HMGXB3Q12766 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC35.78■■■■□ 3.32
HMGXB3Q12766 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
HMGXB3Q12766 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC35.77■■■■□ 3.32
HMGXB3Q12766 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
HMGXB3Q12766 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC35.77■■■■□ 3.32
HMGXB3Q12766 AL138966.2-201ENST00000621997 464 ntBASIC35.77■■■■□ 3.32
HMGXB3Q12766 MIR2861-201ENST00000636310 90 ntBASIC35.77■■■■□ 3.32
HMGXB3Q12766 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC35.77■■■■□ 3.32
HMGXB3Q12766 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC35.76■■■■□ 3.32
HMGXB3Q12766 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
HMGXB3Q12766 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC35.76■■■■□ 3.32
HMGXB3Q12766 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
HMGXB3Q12766 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.31
HMGXB3Q12766 BX664615.1-201ENST00000443558 458 ntBASIC35.76■■■■□ 3.31
HMGXB3Q12766 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC35.76■■■■□ 3.31
HMGXB3Q12766 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC35.76■■■■□ 3.31
HMGXB3Q12766 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC35.76■■■■□ 3.31
HMGXB3Q12766 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC35.76■■■■□ 3.31
HMGXB3Q12766 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC35.76■■■■□ 3.31
HMGXB3Q12766 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
HMGXB3Q12766 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC35.76■■■■□ 3.31
HMGXB3Q12766 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC35.75■■■■□ 3.31
HMGXB3Q12766 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC35.75■■■■□ 3.31
HMGXB3Q12766 CLN6-204ENST00000564752 900 ntTSL 3 BASIC35.75■■■■□ 3.31
HMGXB3Q12766 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
HMGXB3Q12766 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC35.75■■■■□ 3.31
HMGXB3Q12766 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC35.75■■■■□ 3.31
HMGXB3Q12766 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
HMGXB3Q12766 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
HMGXB3Q12766 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.74■■■■□ 3.31
HMGXB3Q12766 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
HMGXB3Q12766 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
HMGXB3Q12766 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
HMGXB3Q12766 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC35.74■■■■□ 3.31
HMGXB3Q12766 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
HMGXB3Q12766 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
HMGXB3Q12766 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
HMGXB3Q12766 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
HMGXB3Q12766 YBX1P2-201ENST00000489612 999 ntBASIC35.73■■■■□ 3.31
HMGXB3Q12766 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC35.73■■■■□ 3.31
HMGXB3Q12766 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
HMGXB3Q12766 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
HMGXB3Q12766 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC35.72■■■■□ 3.31
HMGXB3Q12766 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
HMGXB3Q12766 AC004980.1-204ENST00000429707 299 ntBASIC35.72■■■■□ 3.31
HMGXB3Q12766 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC35.72■■■■□ 3.31
HMGXB3Q12766 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
HMGXB3Q12766 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC35.72■■■■□ 3.31
HMGXB3Q12766 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC35.71■■■■□ 3.31
HMGXB3Q12766 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC35.71■■■■□ 3.31
HMGXB3Q12766 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
HMGXB3Q12766 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
HMGXB3Q12766 BET1L-202ENST00000332865 533 ntTSL 5 BASIC35.71■■■■□ 3.31
HMGXB3Q12766 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC35.71■■■■□ 3.31
HMGXB3Q12766 AL121956.5-201ENST00000625261 221 ntBASIC35.71■■■■□ 3.31
HMGXB3Q12766 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC35.71■■■■□ 3.31
HMGXB3Q12766 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
HMGXB3Q12766 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC35.7■■■■□ 3.31
HMGXB3Q12766 AC011506.1-201ENST00000474329 610 ntBASIC35.7■■■■□ 3.31
HMGXB3Q12766 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC35.7■■■■□ 3.31
HMGXB3Q12766 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC35.7■■■■□ 3.31
HMGXB3Q12766 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
HMGXB3Q12766 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC35.7■■■■□ 3.31
HMGXB3Q12766 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
HMGXB3Q12766 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
HMGXB3Q12766 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC35.69■■■■□ 3.3
HMGXB3Q12766 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC35.69■■■■□ 3.3
HMGXB3Q12766 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
HMGXB3Q12766 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC35.69■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms