Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 COA6YMR244C-A 315 nt1.94□□□□□ -2.1
BRE1Q07457 YPR002C-AYPR002C-A 198 nt1.93□□□□□ -2.1
BRE1Q07457 DGR2YKL121W 2559 nt1.93□□□□□ -2.1
BRE1Q07457 UTP21YLR409C 2820 nt1.92□□□□□ -2.1
BRE1Q07457 YMR031W-AYMR031W-A 327 nt1.92□□□□□ -2.1
BRE1Q07457 BRR2YER172C 6492 nt1.92□□□□□ -2.1
BRE1Q07457 BPH1YCR032W 6504 nt1.91□□□□□ -2.1
BRE1Q07457 YDR048CYDR048C 315 nt1.91□□□□□ -2.1
BRE1Q07457 RPL39YJL189W 156 nt1.91□□□□□ -2.1
BRE1Q07457 SXM1YDR395W 2835 nt1.9□□□□□ -2.11
BRE1Q07457 NPC2YDL046W 522 nt1.9□□□□□ -2.11
BRE1Q07457 YDR183C-AYDR183C-A 258 nt1.9□□□□□ -2.11
BRE1Q07457 YER097WYER097W 330 nt1.9□□□□□ -2.11
BRE1Q07457 MAM33YIL070C 801 nt1.9□□□□□ -2.11
BRE1Q07457 KCS1YDR017C 3153 nt1.88□□□□□ -2.11
BRE1Q07457 BST1YFL025C 3090 nt1.88□□□□□ -2.11
BRE1Q07457 YJL135WYJL135W 318 nt1.88□□□□□ -2.11
BRE1Q07457 SDH2YLL041C 801 nt1.88□□□□□ -2.11
BRE1Q07457 snR72snR72 98 nt1.87□□□□□ -2.11
BRE1Q07457 YGL149WYGL149W 306 nt1.87□□□□□ -2.11
BRE1Q07457 YAR029WYAR029W 225 nt1.87□□□□□ -2.11
BRE1Q07457 YOR108C-AYOR108C-A 210 nt1.87□□□□□ -2.11
BRE1Q07457 YOR199WYOR199W 330 nt1.87□□□□□ -2.11
BRE1Q07457 ZIP2YGL249W 2115 nt1.87□□□□□ -2.11
BRE1Q07457 CAT8YMR280C 4302 nt1.86□□□□□ -2.11
BRE1Q07457 SBE22YHR103W 2559 nt1.86□□□□□ -2.11
BRE1Q07457 ANS1YHR126C 480 nt1.86□□□□□ -2.11
BRE1Q07457 YMR242W-AYMR242W-A 90 nt1.86□□□□□ -2.11
BRE1Q07457 MVP1YMR004W 1536 nt1.86□□□□□ -2.11
BRE1Q07457 PIG1YLR273C 1947 nt1.85□□□□□ -2.11
BRE1Q07457 VPS15YBR097W 4365 nt1.85□□□□□ -2.11
BRE1Q07457 SEC5YDR166C 2916 nt1.85□□□□□ -2.11
BRE1Q07457 STE5YDR103W 2754 nt1.85□□□□□ -2.11
BRE1Q07457 PAU2YEL049W 363 nt1.85□□□□□ -2.11
BRE1Q07457 AI5_ALPHAQ0070 1893 nt1.85□□□□□ -2.11
BRE1Q07457 NCA2YPR155C 1851 nt1.83□□□□□ -2.12
BRE1Q07457 APL2YKL135C 2181 nt1.83□□□□□ -2.12
BRE1Q07457 CHS1YNL192W 3396 nt1.82□□□□□ -2.12
BRE1Q07457 YFL063WYFL063W 456 nt1.82□□□□□ -2.12
BRE1Q07457 YOL160WYOL160W 342 nt1.82□□□□□ -2.12
BRE1Q07457 DBP6YNR038W 1890 nt1.8□□□□□ -2.12
BRE1Q07457 NOC3YLR002C 1992 nt1.8□□□□□ -2.12
BRE1Q07457 HTL1YCR020W-B 237 nt1.8□□□□□ -2.12
BRE1Q07457 ENV11YGR071C 2583 nt1.79□□□□□ -2.12
BRE1Q07457 YDR182W-AYDR182W-A 204 nt1.79□□□□□ -2.12
BRE1Q07457 YIL102CYIL102C 306 nt1.79□□□□□ -2.12
BRE1Q07457 YMR193C-AYMR193C-A 387 nt1.79□□□□□ -2.12
BRE1Q07457 YMR290W-AYMR290W-A 348 nt1.79□□□□□ -2.12
BRE1Q07457 MON2YNL297C 4911 nt1.79□□□□□ -2.12
BRE1Q07457 SSK2YNR031C 4740 nt1.79□□□□□ -2.12
BRE1Q07457 RAD50YNL250W 3939 nt1.78□□□□□ -2.12
BRE1Q07457 MAD1YGL086W 2250 nt1.78□□□□□ -2.12
BRE1Q07457 YDL211CYDL211C 1119 nt1.78□□□□□ -2.12
BRE1Q07457 EMC5YIL027C 426 nt1.78□□□□□ -2.12
BRE1Q07457 PFD1YJL179W 330 nt1.78□□□□□ -2.12
BRE1Q07457 YMR175W-AYMR175W-A 195 nt1.77□□□□□ -2.13
BRE1Q07457 YNL277W-AYNL277W-A 189 nt1.77□□□□□ -2.13
BRE1Q07457 CDC31YOR257W 486 nt1.77□□□□□ -2.13
BRE1Q07457 MSH3YCR092C 3057 nt1.77□□□□□ -2.13
BRE1Q07457 IRA1YBR140C 9279 nt1.76□□□□□ -2.13
BRE1Q07457 snR65snR65 100 nt1.76□□□□□ -2.13
BRE1Q07457 YML099W-AYML099W-A 330 nt1.76□□□□□ -2.13
BRE1Q07457 OST1YJL002C 1431 nt1.75□□□□□ -2.13
BRE1Q07457 YIL032CYIL032C 357 nt1.75□□□□□ -2.13
BRE1Q07457 YJL015CYJL015C 285 nt1.75□□□□□ -2.13
BRE1Q07457 YLR140WYLR140W 327 nt1.75□□□□□ -2.13
BRE1Q07457 YPR063CYPR063C 423 nt1.75□□□□□ -2.13
BRE1Q07457 UFD2YDL190C 2886 nt1.74□□□□□ -2.13
BRE1Q07457 SCW11YGL028C 1629 nt1.74□□□□□ -2.13
BRE1Q07457 RAD34YDR314C 2079 nt1.74□□□□□ -2.13
BRE1Q07457 YLL054CYLL054C 2532 nt1.74□□□□□ -2.13
BRE1Q07457 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
BRE1Q07457 ALK1YGL021W 2283 nt1.73□□□□□ -2.13
BRE1Q07457 YER181CYER181C 324 nt1.73□□□□□ -2.13
BRE1Q07457 YIR044CYIR044C 186 nt1.73□□□□□ -2.13
BRE1Q07457 YJL022WYJL022W 309 nt1.73□□□□□ -2.13
BRE1Q07457 COF1YLL050C 432 nt1.73□□□□□ -2.13
BRE1Q07457 YOR376WYOR376W 369 nt1.73□□□□□ -2.13
BRE1Q07457 EST2YLR318W 2655 nt1.73□□□□□ -2.13
BRE1Q07457 CUL3YGR003W 2235 nt1.72□□□□□ -2.13
BRE1Q07457 SPT21YMR179W 2277 nt1.72□□□□□ -2.13
BRE1Q07457 YHL042WYHL042W 453 nt1.72□□□□□ -2.13
BRE1Q07457 SPC110YDR356W 2835 nt1.72□□□□□ -2.13
BRE1Q07457 SLI15YBR156C 2097 nt1.71□□□□□ -2.13
BRE1Q07457 VPS54YDR027C 2670 nt1.71□□□□□ -2.14
BRE1Q07457 SEC21YNL287W 2808 nt1.71□□□□□ -2.14
BRE1Q07457 ALG13YGL047W 609 nt1.71□□□□□ -2.14
BRE1Q07457 VPS55YJR044C 423 nt1.71□□□□□ -2.14
BRE1Q07457 NIP100YPL174C 2607 nt1.7□□□□□ -2.14
BRE1Q07457 AIM44YPL158C 2277 nt1.7□□□□□ -2.14
BRE1Q07457 SLX4YLR135W 2247 nt1.7□□□□□ -2.14
BRE1Q07457 snR60snR60 104 nt1.7□□□□□ -2.14
BRE1Q07457 MSN5YDR335W 3675 nt1.7□□□□□ -2.14
BRE1Q07457 KAP122YGL016W 3246 nt1.7□□□□□ -2.14
BRE1Q07457 YGL217CYGL217C 342 nt1.7□□□□□ -2.14
BRE1Q07457 YIL115W-AYIL115W-A 372 nt1.7□□□□□ -2.14
BRE1Q07457 SPC98YNL126W 2541 nt1.7□□□□□ -2.14
BRE1Q07457 YNL284C-BYNL284C-B 5268 nt1.69□□□□□ -2.14
BRE1Q07457 RPL34BYIL052C 366 nt1.69□□□□□ -2.14
BRE1Q07457 PIP2YOR363C 2991 nt1.69□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 45.3 ms