Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YOR199WYOR199W 330 nt1.56□□□□□ -2.16
VPS38Q05919 ALK1YGL021W 2283 nt1.56□□□□□ -2.16
VPS38Q05919 PET127YOR017W 2403 nt1.56□□□□□ -2.16
VPS38Q05919 NCA2YPR155C 1851 nt1.55□□□□□ -2.16
VPS38Q05919 snR72snR72 98 nt1.55□□□□□ -2.16
VPS38Q05919 RPL35AYDL191W 363 nt1.55□□□□□ -2.16
VPS38Q05919 YDR102CYDR102C 333 nt1.55□□□□□ -2.16
VPS38Q05919 PCC1YKR095W-A 267 nt1.55□□□□□ -2.16
VPS38Q05919 COF1YLL050C 432 nt1.55□□□□□ -2.16
VPS38Q05919 YMR242W-AYMR242W-A 90 nt1.55□□□□□ -2.16
VPS38Q05919 UFD2YDL190C 2886 nt1.55□□□□□ -2.16
VPS38Q05919 KAP122YGL016W 3246 nt1.55□□□□□ -2.16
VPS38Q05919 ZIP2YGL249W 2115 nt1.54□□□□□ -2.16
VPS38Q05919 NUT1YGL151W 3399 nt1.54□□□□□ -2.16
VPS38Q05919 YDR426CYDR426C 378 nt1.54□□□□□ -2.16
VPS38Q05919 YHR007C-AYHR007C-A 216 nt1.54□□□□□ -2.16
VPS38Q05919 YKL136WYKL136W 399 nt1.54□□□□□ -2.16
VPS38Q05919 HTB2YBL002W 396 nt1.54□□□□□ -2.16
VPS38Q05919 YOR108C-AYOR108C-A 210 nt1.54□□□□□ -2.16
VPS38Q05919 YPL225WYPL225W 441 nt1.54□□□□□ -2.16
VPS38Q05919 YPR002C-AYPR002C-A 198 nt1.54□□□□□ -2.16
VPS38Q05919 AI5_ALPHAQ0070 1893 nt1.54□□□□□ -2.16
VPS38Q05919 BST1YFL025C 3090 nt1.53□□□□□ -2.16
VPS38Q05919 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
VPS38Q05919 VPS55YJR044C 423 nt1.53□□□□□ -2.16
VPS38Q05919 SDH2YLL041C 801 nt1.53□□□□□ -2.16
VPS38Q05919 NOC3YLR002C 1992 nt1.53□□□□□ -2.16
VPS38Q05919 YCS4YLR272C 3531 nt1.53□□□□□ -2.16
VPS38Q05919 YMR175W-AYMR175W-A 195 nt1.53□□□□□ -2.16
VPS38Q05919 YOL160WYOL160W 342 nt1.53□□□□□ -2.16
VPS38Q05919 YLR419WYLR419W 4308 nt1.52□□□□□ -2.17
VPS38Q05919 RAD50YNL250W 3939 nt1.52□□□□□ -2.17
VPS38Q05919 YKL118WYKL118W 312 nt1.52□□□□□ -2.17
VPS38Q05919 YLR255CYLR255C 354 nt1.52□□□□□ -2.17
VPS38Q05919 YOR376WYOR376W 369 nt1.52□□□□□ -2.17
VPS38Q05919 REV3YPL167C 4515 nt1.52□□□□□ -2.17
VPS38Q05919 SEC5YDR166C 2916 nt1.52□□□□□ -2.17
VPS38Q05919 NPC2YDL046W 522 nt1.51□□□□□ -2.17
VPS38Q05919 YGL217CYGL217C 342 nt1.51□□□□□ -2.17
VPS38Q05919 YJL135WYJL135W 318 nt1.51□□□□□ -2.17
VPS38Q05919 POL5YEL055C 3069 nt1.51□□□□□ -2.17
VPS38Q05919 MAD1YGL086W 2250 nt1.5□□□□□ -2.17
VPS38Q05919 SMC4YLR086W 4257 nt1.5□□□□□ -2.17
VPS38Q05919 TAR1YLR154W-C 375 nt1.5□□□□□ -2.17
VPS38Q05919 FIG2YCR089W 4830 nt1.49□□□□□ -2.17
VPS38Q05919 YDR169C-AYDR169C-A 150 nt1.49□□□□□ -2.17
VPS38Q05919 YLR140WYLR140W 327 nt1.49□□□□□ -2.17
VPS38Q05919 FYV8YGR196C 2454 nt1.49□□□□□ -2.17
VPS38Q05919 NIP100YPL174C 2607 nt1.49□□□□□ -2.17
VPS38Q05919 SXM1YDR395W 2835 nt1.48□□□□□ -2.17
VPS38Q05919 CHS1YNL192W 3396 nt1.48□□□□□ -2.17
VPS38Q05919 YJR011CYJR011C 786 nt1.48□□□□□ -2.17
VPS38Q05919 YMR290W-AYMR290W-A 348 nt1.48□□□□□ -2.17
VPS38Q05919 snR36snR36 182 nt1.48□□□□□ -2.17
VPS38Q05919 VPS54YDR027C 2670 nt1.48□□□□□ -2.17
VPS38Q05919 KIP1YBL063W 3336 nt1.48□□□□□ -2.17
VPS38Q05919 SLX4YLR135W 2247 nt1.47□□□□□ -2.17
VPS38Q05919 NHP2YDL208W 471 nt1.47□□□□□ -2.17
VPS38Q05919 RAD34YDR314C 2079 nt1.47□□□□□ -2.17
VPS38Q05919 YDR048CYDR048C 315 nt1.46□□□□□ -2.18
VPS38Q05919 YDR183C-AYDR183C-A 258 nt1.46□□□□□ -2.18
VPS38Q05919 YDR413CYDR413C 576 nt1.46□□□□□ -2.18
VPS38Q05919 YAR029WYAR029W 225 nt1.46□□□□□ -2.18
VPS38Q05919 CDC31YOR257W 486 nt1.46□□□□□ -2.18
VPS38Q05919 SCW11YGL028C 1629 nt1.46□□□□□ -2.18
VPS38Q05919 YLL054CYLL054C 2532 nt1.46□□□□□ -2.18
VPS38Q05919 SLI15YBR156C 2097 nt1.45□□□□□ -2.18
VPS38Q05919 SPC98YNL126W 2541 nt1.45□□□□□ -2.18
VPS38Q05919 AHC1YOR023C 1701 nt1.44□□□□□ -2.18
VPS38Q05919 YFL032WYFL032W 321 nt1.44□□□□□ -2.18
VPS38Q05919 YOR161W-BYOR161W-B 261 nt1.44□□□□□ -2.18
VPS38Q05919 YSY6YBR162W-A 198 nt1.44□□□□□ -2.18
VPS38Q05919 EST2YLR318W 2655 nt1.44□□□□□ -2.18
VPS38Q05919 CDC25YLR310C 4770 nt1.43□□□□□ -2.18
VPS38Q05919 HKR1YDR420W 5409 nt1.43□□□□□ -2.18
VPS38Q05919 YER097WYER097W 330 nt1.43□□□□□ -2.18
VPS38Q05919 MAM33YIL070C 801 nt1.43□□□□□ -2.18
VPS38Q05919 YIR044CYIR044C 186 nt1.43□□□□□ -2.18
VPS38Q05919 ALY2YJL084C 3141 nt1.42□□□□□ -2.18
VPS38Q05919 NUP192YJL039C 5052 nt1.41□□□□□ -2.18
VPS38Q05919 YJL015CYJL015C 285 nt1.41□□□□□ -2.18
VPS38Q05919 RPL39YJL189W 156 nt1.41□□□□□ -2.18
VPS38Q05919 PMD1YER132C 5262 nt1.41□□□□□ -2.18
VPS38Q05919 TRM732YMR259C 4263 nt1.41□□□□□ -2.18
VPS38Q05919 PIK1YNL267W 3201 nt1.41□□□□□ -2.18
VPS38Q05919 COG4YPR105C 2586 nt1.41□□□□□ -2.18
VPS38Q05919 LCD1YDR499W 2244 nt1.4□□□□□ -2.18
VPS38Q05919 MSN5YDR335W 3675 nt1.4□□□□□ -2.19
VPS38Q05919 SSK2YNR031C 4740 nt1.4□□□□□ -2.19
VPS38Q05919 YNL146WYNL146W 303 nt1.4□□□□□ -2.19
VPS38Q05919 snR14snR14 160 nt1.4□□□□□ -2.19
VPS38Q05919 MPT5YGL178W 2580 nt1.4□□□□□ -2.19
VPS38Q05919 OST1YJL002C 1431 nt1.4□□□□□ -2.19
VPS38Q05919 AZF1YOR113W 2745 nt1.39□□□□□ -2.19
VPS38Q05919 HTL1YCR020W-B 237 nt1.39□□□□□ -2.19
VPS38Q05919 YDL211CYDL211C 1119 nt1.39□□□□□ -2.19
VPS38Q05919 YFL063WYFL063W 456 nt1.39□□□□□ -2.19
VPS38Q05919 YGL149WYGL149W 306 nt1.39□□□□□ -2.19
VPS38Q05919 SWI4YER111C 3282 nt1.39□□□□□ -2.19
VPS38Q05919 LAA1YJL207C 6045 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 36.6 ms