Protein–RNA interactions for Protein: Q04172

SHE9, Sensitive to high expression protein 9, mitochondrial, yeastyeast

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE9Q04172 YBR182C-AYBR182C-A 195 nt2.4□□□□□ -2.03
SHE9Q04172 RTT101YJL047C 2529 nt2.4□□□□□ -2.03
SHE9Q04172 SCD5YOR329C 2619 nt2.39□□□□□ -2.03
SHE9Q04172 DNF1YER166W 4716 nt2.39□□□□□ -2.03
SHE9Q04172 RPL34BYIL052C 366 nt2.39□□□□□ -2.03
SHE9Q04172 PUT3YKL015W 2940 nt2.39□□□□□ -2.03
SHE9Q04172 UBP15YMR304W 3693 nt2.39□□□□□ -2.03
SHE9Q04172 IRC8YJL051W 2469 nt2.39□□□□□ -2.03
SHE9Q04172 YOR108C-AYOR108C-A 210 nt2.38□□□□□ -2.03
SHE9Q04172 CSF1YLR087C 8877 nt2.38□□□□□ -2.03
SHE9Q04172 CAT2YML042W 2013 nt2.37□□□□□ -2.03
SHE9Q04172 KOG1YHR186C 4674 nt2.37□□□□□ -2.03
SHE9Q04172 SPO75YLL005C 2607 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)G1tW(CCA)G1 72 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)G2tW(CCA)G2 72 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)JtW(CCA)J 72 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)KtW(CCA)K 72 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)MtW(CCA)M 72 nt2.37□□□□□ -2.03
SHE9Q04172 tW(CCA)PtW(CCA)P 72 nt2.37□□□□□ -2.03
SHE9Q04172 ATP7YKL016C 525 nt2.37□□□□□ -2.03
SHE9Q04172 MSH5YDL154W 2706 nt2.37□□□□□ -2.03
SHE9Q04172 RAD34YDR314C 2079 nt2.37□□□□□ -2.03
SHE9Q04172 MLH3YPL164C 2148 nt2.36□□□□□ -2.03
SHE9Q04172 ENV11YGR071C 2583 nt2.36□□□□□ -2.03
SHE9Q04172 YKU70YMR284W 1809 nt2.36□□□□□ -2.03
SHE9Q04172 YCR087C-AYCR087C-A 462 nt2.36□□□□□ -2.03
SHE9Q04172 MRP10YDL045W-A 288 nt2.36□□□□□ -2.03
SHE9Q04172 SGF11YPL047W 300 nt2.36□□□□□ -2.03
SHE9Q04172 TOF1YNL273W 3717 nt2.36□□□□□ -2.03
SHE9Q04172 PDR11YIL013C 4236 nt2.35□□□□□ -2.03
SHE9Q04172 VTC1YER072W 390 nt2.35□□□□□ -2.03
SHE9Q04172 YOR376WYOR376W 369 nt2.35□□□□□ -2.03
SHE9Q04172 YPR097WYPR097W 3222 nt2.35□□□□□ -2.03
SHE9Q04172 MAD1YGL086W 2250 nt2.35□□□□□ -2.03
SHE9Q04172 IRE1YHR079C 3348 nt2.35□□□□□ -2.03
SHE9Q04172 APL2YKL135C 2181 nt2.34□□□□□ -2.03
SHE9Q04172 CTR9YOL145C 3234 nt2.34□□□□□ -2.03
SHE9Q04172 MCM10YIL150C 1716 nt2.34□□□□□ -2.03
SHE9Q04172 YDR182W-AYDR182W-A 204 nt2.34□□□□□ -2.03
SHE9Q04172 YIR030W-AYIR030W-A 384 nt2.34□□□□□ -2.03
SHE9Q04172 HMI1YOL095C 2121 nt2.34□□□□□ -2.03
SHE9Q04172 NEW1YPL226W 3591 nt2.34□□□□□ -2.04
SHE9Q04172 SPO21YOL091W 1830 nt2.33□□□□□ -2.04
SHE9Q04172 NUP170YBL079W 4509 nt2.33□□□□□ -2.04
SHE9Q04172 SSD1YDR293C 3753 nt2.33□□□□□ -2.04
SHE9Q04172 AGC1YPR021C 2709 nt2.33□□□□□ -2.04
SHE9Q04172 YJL150WYJL150W 303 nt2.33□□□□□ -2.04
SHE9Q04172 YKL165C-AYKL165C-A 234 nt2.33□□□□□ -2.04
SHE9Q04172 RPS25BYLR333C 327 nt2.33□□□□□ -2.04
SHE9Q04172 ELG1YOR144C 2376 nt2.33□□□□□ -2.04
SHE9Q04172 IST2YBR086C 2841 nt2.33□□□□□ -2.04
SHE9Q04172 SAP185YJL098W 3177 nt2.33□□□□□ -2.04
SHE9Q04172 YJL120WYJL120W 324 nt2.32□□□□□ -2.04
SHE9Q04172 TFC3YAL001C 3483 nt2.32□□□□□ -2.04
SHE9Q04172 NOC3YLR002C 1992 nt2.32□□□□□ -2.04
SHE9Q04172 SEC16YPL085W 6588 nt2.31□□□□□ -2.04
SHE9Q04172 snR70snR70 164 nt2.31□□□□□ -2.04
SHE9Q04172 YHR180W-AYHR180W-A 183 nt2.31□□□□□ -2.04
SHE9Q04172 STH1YIL126W 4080 nt2.31□□□□□ -2.04
SHE9Q04172 PDR3YBL005W 2931 nt2.31□□□□□ -2.04
SHE9Q04172 DGR2YKL121W 2559 nt2.3□□□□□ -2.04
SHE9Q04172 YNL338WYNL338W 159 nt2.3□□□□□ -2.04
SHE9Q04172 PIG1YLR273C 1947 nt2.3□□□□□ -2.04
SHE9Q04172 SLN1YIL147C 3663 nt2.3□□□□□ -2.04
SHE9Q04172 YDL118WYDL118W 381 nt2.29□□□□□ -2.04
SHE9Q04172 YLR140WYLR140W 327 nt2.29□□□□□ -2.04
SHE9Q04172 YBR174CYBR174C 315 nt2.29□□□□□ -2.04
SHE9Q04172 BUD2YKL092C 3315 nt2.29□□□□□ -2.04
SHE9Q04172 BNI1YNL271C 5862 nt2.28□□□□□ -2.04
SHE9Q04172 FRK1YPL141C 2598 nt2.28□□□□□ -2.04
SHE9Q04172 RPL31AYDL075W 342 nt2.28□□□□□ -2.04
SHE9Q04172 YGL217CYGL217C 342 nt2.28□□□□□ -2.04
SHE9Q04172 YIR044CYIR044C 186 nt2.28□□□□□ -2.04
SHE9Q04172 YLR342W-AYLR342W-A 174 nt2.28□□□□□ -2.04
SHE9Q04172 YNL097C-BYNL097C-B 123 nt2.28□□□□□ -2.04
SHE9Q04172 YBR131C-AYBR131C-A 90 nt2.28□□□□□ -2.04
SHE9Q04172 HER1YOR227W 3741 nt2.28□□□□□ -2.04
SHE9Q04172 HIR3YJR140C 4947 nt2.28□□□□□ -2.05
SHE9Q04172 YLL007CYLL007C 1998 nt2.27□□□□□ -2.05
SHE9Q04172 UFD4YKL010C 4452 nt2.27□□□□□ -2.05
SHE9Q04172 YFR016CYFR016C 3702 nt2.27□□□□□ -2.05
SHE9Q04172 TRS65YGR166W 1683 nt2.26□□□□□ -2.05
SHE9Q04172 USO1YDL058W 5373 nt2.26□□□□□ -2.05
SHE9Q04172 ECM12YHR021W-A 456 nt2.26□□□□□ -2.05
SHE9Q04172 YOR072W-BYOR072W-B 162 nt2.26□□□□□ -2.05
SHE9Q04172 PRP39YML046W 1890 nt2.25□□□□□ -2.05
SHE9Q04172 ULI1YFR026C 510 nt2.25□□□□□ -2.05
SHE9Q04172 YJL052C-AYJL052C-A 120 nt2.25□□□□□ -2.05
SHE9Q04172 YBL008W-AYBL008W-A 240 nt2.25□□□□□ -2.05
SHE9Q04172 DGR1YNL130C-A 147 nt2.25□□□□□ -2.05
SHE9Q04172 CUL3YGR003W 2235 nt2.25□□□□□ -2.05
SHE9Q04172 NAB6YML117W 3405 nt2.24□□□□□ -2.05
SHE9Q04172 ATG11YPR049C 3537 nt2.24□□□□□ -2.05
SHE9Q04172 SEY1YOR165W 2331 nt2.24□□□□□ -2.05
SHE9Q04172 PTP2YOR208W 2253 nt2.24□□□□□ -2.05
SHE9Q04172 Q0092Q0092 141 nt2.23□□□□□ -2.05
SHE9Q04172 COF1YLL050C 432 nt2.23□□□□□ -2.05
SHE9Q04172 YNL144CYNL144C 2223 nt2.23□□□□□ -2.05
SHE9Q04172 MSH6YDR097C 3729 nt2.23□□□□□ -2.05
SHE9Q04172 UBP2YOR124C 3819 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 50.3 ms