Protein–RNA interactions for Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 DMTF1-205ENST00000414630 627 ntTSL 511.34□□□□□ -0.597e-12■■□□□ 12.5
U2AF1Q01081 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.612e-6■■□□□ 12.5
U2AF1Q01081 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.662e-6■■□□□ 12.5
U2AF1Q01081 NPIPB4-212ENST00000540103 631 ntTSL 510.7□□□□□ -0.74e-9■■□□□ 12.5
U2AF1Q01081 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC10.56□□□□□ -0.722e-6■■□□□ 12.5
U2AF1Q01081 NPIPB4-207ENST00000536041 513 ntTSL 410.5□□□□□ -0.734e-9■■□□□ 12.5
U2AF1Q01081 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.792e-6■■□□□ 12.5
U2AF1Q01081 NPIPB4-215ENST00000542133 910 ntTSL 310.05□□□□□ -0.84e-9■■□□□ 12.5
U2AF1Q01081 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.834e-9■■□□□ 12.5
U2AF1Q01081 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC9.81□□□□□ -0.842e-6■■□□□ 12.5
U2AF1Q01081 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC9.78□□□□□ -0.842e-6■■□□□ 12.5
U2AF1Q01081 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.852e-6■■□□□ 12.5
U2AF1Q01081 DMTF1-217ENST00000448598 572 ntTSL 49.2□□□□□ -0.947e-12■■□□□ 12.5
U2AF1Q01081 NPIPB4-206ENST00000529969 519 ntTSL 49.17□□□□□ -0.944e-9■■□□□ 12.5
U2AF1Q01081 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.05□□□□□ -0.967e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-216ENST00000447863 3954 ntTSL 1 (best)8.88□□□□□ -0.997e-12■■□□□ 12.5
U2AF1Q01081 NPIPB4-218ENST00000543654 513 ntTSL 48.7□□□□□ -1.024e-9■■□□□ 12.5
U2AF1Q01081 DMTF1-219ENST00000453049 585 ntTSL 48.69□□□□□ -1.027e-12■■□□□ 12.5
U2AF1Q01081 NPIPB4-202ENST00000341400 767 ntTSL 28.55□□□□□ -1.044e-9■■□□□ 12.5
U2AF1Q01081 PARP2-210ENST00000539930 635 ntTSL 37.71□□□□□ -1.182e-6■■□□□ 12.5
U2AF1Q01081 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.58□□□□□ -1.24e-9■■□□□ 12.5
U2AF1Q01081 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.57□□□□□ -1.22e-6■■□□□ 12.5
U2AF1Q01081 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.51□□□□□ -1.217e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-234ENST00000582925 770 ntTSL 37.46□□□□□ -1.227e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-227ENST00000579677 3915 ntTSL 1 (best)7.44□□□□□ -1.227e-12■■□□□ 12.5
U2AF1Q01081 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.33□□□□□ -1.242e-6■■□□□ 12.5
U2AF1Q01081 AP1G1-203ENST00000450149 1166 ntTSL 27.19□□□□□ -1.262e-6■■□□□ 12.5
U2AF1Q01081 NPIPB4-205ENST00000520808 560 ntTSL 47.15□□□□□ -1.264e-9■■□□□ 12.5
U2AF1Q01081 DMTF1-206ENST00000420131 568 ntTSL 47.11□□□□□ -1.277e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-210ENST00000428819 533 ntTSL 47.11□□□□□ -1.277e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-218ENST00000449088 783 ntTSL 57.11□□□□□ -1.277e-12■■□□□ 12.5
U2AF1Q01081 DLG1-224ENST00000475394 864 ntTSL 57.05□□□□□ -1.282e-6■■□□□ 12.5
U2AF1Q01081 DMTF1-207ENST00000423590 545 ntTSL 56.98□□□□□ -1.297e-12■■□□□ 12.5
U2AF1Q01081 MKLN1-210ENST00000496815 734 ntTSL 26.76□□□□□ -1.332e-6■■□□□ 12.5
U2AF1Q01081 DMTF1-203ENST00000412139 4460 ntTSL 26.66□□□□□ -1.347e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-212ENST00000432366 557 ntTSL 56.49□□□□□ -1.377e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-224ENST00000547146 3657 ntTSL 56.32□□□□□ -1.47e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-228ENST00000579850 3483 ntTSL 56.28□□□□□ -1.47e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-208ENST00000425406 3868 ntTSL 26.06□□□□□ -1.447e-12■■□□□ 12.5
U2AF1Q01081 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.454e-9■■□□□ 12.5
U2AF1Q01081 DMTF1-211ENST00000430405 637 ntTSL 55.97□□□□□ -1.457e-12■■□□□ 12.5
U2AF1Q01081 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.492e-6■■□□□ 12.5
U2AF1Q01081 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.68□□□□□ -1.52e-6■■□□□ 12.5
U2AF1Q01081 DMTF1-209ENST00000425705 980 ntTSL 1 (best)5.15□□□□□ -1.597e-12■■□□□ 12.5
U2AF1Q01081 DMTF1-215ENST00000446796 610 ntTSL 54.9□□□□□ -1.637e-12■■□□□ 12.5
U2AF1Q01081 NPIPB4-204ENST00000518761 576 ntTSL 34.43□□□□□ -1.74e-9■■□□□ 12.5
U2AF1Q01081 DMTF1-236ENST00000583833 171 ntTSL 33□□□□□ -1.937e-12■■□□□ 12.5
U2AF1Q01081 EPB41-213ENST00000636666 3642 ntTSL 58.54□□□□□ -1.044e-8■■□□□ 12.5
U2AF1Q01081 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.62e-6■■□□□ 12.5
U2AF1Q01081 RSPRY1-201ENST00000394420 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.322e-6■■□□□ 12.5
U2AF1Q01081 RSPRY1-205ENST00000562768 585 ntTSL 46.8□□□□□ -1.322e-6■■□□□ 12.5
U2AF1Q01081 VCP-207ENST00000493886 2942 ntTSL 217.95■□□□□ 0.463e-6■■□□□ 12.5
U2AF1Q01081 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.43e-6■■□□□ 12.5
U2AF1Q01081 VCP-206ENST00000480327 884 ntTSL 512.08□□□□□ -0.483e-6■■□□□ 12.5
U2AF1Q01081 VCP-205ENST00000479300 559 ntTSL 1 (best)8.79□□□□□ -13e-6■■□□□ 12.5
U2AF1Q01081 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.26■■□□□ 1.797e-11■■□□□ 12.5
U2AF1Q01081 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.797e-11■■□□□ 12.5
U2AF1Q01081 NCKAP1-207ENST00000493359 615 ntTSL 28.83□□□□□ -17e-11■■□□□ 12.5
U2AF1Q01081 SRC-206ENST00000472968 461 ntTSL 323.08■■□□□ 1.291e-6■■□□□ 12.5
U2AF1Q01081 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.971e-6■■□□□ 12.5
U2AF1Q01081 SRC-202ENST00000373558 4304 ntTSL 5 BASIC18.36■□□□□ 0.531e-6■■□□□ 12.5
U2AF1Q01081 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.261e-6■■□□□ 12.5
U2AF1Q01081 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.121e-6■■□□□ 12.5
U2AF1Q01081 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.031e-6■■□□□ 12.5
U2AF1Q01081 XPO5-212ENST00000612911 911 ntTSL 212.77□□□□□ -0.371e-6■■□□□ 12.5
U2AF1Q01081 XPO5-203ENST00000398835 868 ntTSL 512.06□□□□□ -0.481e-6■■□□□ 12.5
U2AF1Q01081 PLD1-211ENST00000471075 1773 ntTSL 211.11□□□□□ -0.631e-6■■□□□ 12.5
U2AF1Q01081 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.95□□□□□ -1.141e-6■■□□□ 12.5
U2AF1Q01081 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.461e-6■■□□□ 12.5
U2AF1Q01081 AC138932.1-201ENST00000534164 6830 ntBASIC23.18■■□□□ 1.35e-7■■□□□ 12.5
U2AF1Q01081 NPIPA1-203ENST00000472413 5345 ntTSL 220.38■□□□□ 0.855e-7■■□□□ 12.5
U2AF1Q01081 NUP214-216ENST00000526346 577 ntTSL 48.97□□□□□ -0.977e-11■■□□□ 12.5
U2AF1Q01081 NUP214-212ENST00000524578 524 ntTSL 32.52□□□□□ -2.017e-11■■□□□ 12.5
U2AF1Q01081 DCTN4-204ENST00000517421 576 ntTSL 520.79■□□□□ 0.922e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-207ENST00000519313 647 ntTSL 518.84■□□□□ 0.612e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-210ENST00000521093 473 ntTSL 415.71■□□□□ 0.112e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC13.29□□□□□ -0.282e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-211ENST00000521448 585 ntTSL 512.69□□□□□ -0.382e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.482e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-205ENST00000518015 579 ntTSL 311.13□□□□□ -0.632e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-212ENST00000521533 578 ntTSL 410.29□□□□□ -0.762e-6■■□□□ 12.5
U2AF1Q01081 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.87□□□□□ -1.312e-6■■□□□ 12.5
U2AF1Q01081 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.613e-7■■□□□ 12.4
U2AF1Q01081 HGD-209ENST00000492108 631 ntTSL 29.43□□□□□ -0.93e-7■■□□□ 12.4
U2AF1Q01081 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.75■□□□□ 0.757e-7■■□□□ 12.4
U2AF1Q01081 SEC24D-208ENST00000506622 1319 ntTSL 219.47■□□□□ 0.717e-7■■□□□ 12.4
U2AF1Q01081 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.287e-7■■□□□ 12.4
U2AF1Q01081 SEC24D-209ENST00000509818 1870 ntTSL 1 (best)11.9□□□□□ -0.57e-7■■□□□ 12.4
U2AF1Q01081 SEC24D-214ENST00000514561 3806 ntTSL 1 (best)6.11□□□□□ -1.437e-7■■□□□ 12.4
U2AF1Q01081 NAP1L4-209ENST00000492594 570 ntTSL 323.65■■□□□ 1.381e-8■■□□□ 12.4
U2AF1Q01081 NAP1L4-210ENST00000492685 850 ntTSL 58.68□□□□□ -1.021e-8■■□□□ 12.4
U2AF1Q01081 NAP1L4-215ENST00000528363 685 ntTSL 27.15□□□□□ -1.261e-8■■□□□ 12.4
U2AF1Q01081 NAP1L4-208ENST00000483643 690 ntTSL 27.15□□□□□ -1.261e-8■■□□□ 12.4
U2AF1Q01081 NAP1L4-214ENST00000528261 644 ntTSL 25.66□□□□□ -1.51e-8■■□□□ 12.4
U2AF1Q01081 NCL-210ENST00000494618 910 ntTSL 26.67□□□□□ -1.342e-18■■□□□ 12.4
U2AF1Q01081 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.924e-8■■□□□ 12.4
U2AF1Q01081 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.024e-8■■□□□ 12.4
U2AF1Q01081 SRRM2-228ENST00000576878 1141 ntTSL 223.34■■□□□ 1.332e-8■■□□□ 12.4
U2AF1Q01081 SON-217ENST00000478183 1818 ntTSL 1 (best)12.45□□□□□ -0.424e-10■■□□□ 12.4
Retrieved 100 of 10,096 protein–RNA pairs in 67.3 ms