RNA–Protein interactions for RNA: ENST00000520808.6

NPIPB4-205, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-205ENST00000520808 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
NPIPB4-205ENST00000520808 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
NPIPB4-205ENST00000520808 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
NPIPB4-205ENST00000520808 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
NPIPB4-205ENST00000520808 FOXD1Q16676 465 aa15.54■□□□□ 0.08
NPIPB4-205ENST00000520808 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
NPIPB4-205ENST00000520808 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
NPIPB4-205ENST00000520808 ADRA2BP18089 450 aa14.58□□□□□ -0.08
NPIPB4-205ENST00000520808 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
NPIPB4-205ENST00000520808 MSH5O43196 834 aa14.44□□□□□ -0.1
NPIPB4-205ENST00000520808 POTEDQ86YR6 584 aa14□□□□□ -0.17
NPIPB4-205ENST00000520808 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
NPIPB4-205ENST00000520808 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
NPIPB4-205ENST00000520808 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
NPIPB4-205ENST00000520808 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
NPIPB4-205ENST00000520808 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
NPIPB4-205ENST00000520808 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
NPIPB4-205ENST00000520808 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
NPIPB4-205ENST00000520808 RNF216Q9NWF9 866 aaPredicted RBP12.68□□□□□ -0.38
NPIPB4-205ENST00000520808 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
NPIPB4-205ENST00000520808 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
NPIPB4-205ENST00000520808 CACNB1Q02641 598 aaPredicted RBP12.38□□□□□ -0.43
NPIPB4-205ENST00000520808 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
NPIPB4-205ENST00000520808 KCNA4P22459 653 aa12.32□□□□□ -0.44
NPIPB4-205ENST00000520808 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
NPIPB4-205ENST00000520808 NISCHQ9Y2I1 1504 aa12.18□□□□□ -0.46
NPIPB4-205ENST00000520808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPIPB4-205ENST00000520808 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-205ENST00000520808 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
NPIPB4-205ENST00000520808 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
NPIPB4-205ENST00000520808 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-205ENST00000520808 CAPN15O75808 1086 aa11.71□□□□□ -0.53
NPIPB4-205ENST00000520808 DSG3P32926 999 aa11.62□□□□□ -0.55
NPIPB4-205ENST00000520808 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-205ENST00000520808 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
NPIPB4-205ENST00000520808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
NPIPB4-205ENST00000520808 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
NPIPB4-205ENST00000520808 APLP2Q06481 763 aa11.52□□□□□ -0.57
NPIPB4-205ENST00000520808 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
NPIPB4-205ENST00000520808 ABCB7O75027 752 aa11.48□□□□□ -0.57
NPIPB4-205ENST00000520808 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
NPIPB4-205ENST00000520808 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
NPIPB4-205ENST00000520808 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
NPIPB4-205ENST00000520808 ZBTB22O15209 634 aa11.35□□□□□ -0.59
NPIPB4-205ENST00000520808 ABCC9O60706 1549 aa11.31□□□□□ -0.6
NPIPB4-205ENST00000520808 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-205ENST00000520808 POLA2Q14181 598 aa11.26□□□□□ -0.61
NPIPB4-205ENST00000520808 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
NPIPB4-205ENST00000520808 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
NPIPB4-205ENST00000520808 POTEHQ6S545 545 aa10.98□□□□□ -0.65
NPIPB4-205ENST00000520808 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.65
NPIPB4-205ENST00000520808 OSCARQ8IYS5 282 aa10.9□□□□□ -0.66
NPIPB4-205ENST00000520808 CCDC180Q9P1Z9 1646 aa10.89□□□□□ -0.67
NPIPB4-205ENST00000520808 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
NPIPB4-205ENST00000520808 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
NPIPB4-205ENST00000520808 EHMT2Q96KQ7 1210 aa10.81□□□□□ -0.68
NPIPB4-205ENST00000520808 CHRDL2Q6WN34 429 aa10.8□□□□□ -0.68
NPIPB4-205ENST00000520808 DCAF8L2P0C7V8 631 aa10.77□□□□□ -0.69
NPIPB4-205ENST00000520808 FBLN2P98095 1184 aa10.76□□□□□ -0.69
NPIPB4-205ENST00000520808 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
NPIPB4-205ENST00000520808 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
NPIPB4-205ENST00000520808 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
NPIPB4-205ENST00000520808 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
NPIPB4-205ENST00000520808 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
NPIPB4-205ENST00000520808 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
NPIPB4-205ENST00000520808 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
NPIPB4-205ENST00000520808 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
NPIPB4-205ENST00000520808 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
NPIPB4-205ENST00000520808 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-205ENST00000520808 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
NPIPB4-205ENST00000520808 FXR2P51116 673 aaKnown RBP eCLIP10.51□□□□□ -0.73
NPIPB4-205ENST00000520808 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
NPIPB4-205ENST00000520808 NACADO15069 1562 aa10.48□□□□□ -0.73
NPIPB4-205ENST00000520808 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-205ENST00000520808 HAX1O00165 279 aa10.36□□□□□ -0.75
NPIPB4-205ENST00000520808 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
NPIPB4-205ENST00000520808 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-205ENST00000520808 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
NPIPB4-205ENST00000520808 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
NPIPB4-205ENST00000520808 EVX2Q03828 476 aa10.28□□□□□ -0.76
NPIPB4-205ENST00000520808 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
NPIPB4-205ENST00000520808 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
NPIPB4-205ENST00000520808 MYO15BQ96JP2 1530 aa10.22□□□□□ -0.77
NPIPB4-205ENST00000520808 BICRAQ9NZM4 1560 aa10.18□□□□□ -0.78
NPIPB4-205ENST00000520808 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
NPIPB4-205ENST00000520808 C19orf67A6NJJ6 358 aa10.17□□□□□ -0.78
NPIPB4-205ENST00000520808 UNC13AQ9UPW8 1703 aa10.15□□□□□ -0.78
NPIPB4-205ENST00000520808 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
NPIPB4-205ENST00000520808 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
NPIPB4-205ENST00000520808 CC2D2AQ9P2K1 1620 aa10.11□□□□□ -0.79
NPIPB4-205ENST00000520808 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
NPIPB4-205ENST00000520808 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
NPIPB4-205ENST00000520808 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
NPIPB4-205ENST00000520808 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
NPIPB4-205ENST00000520808 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
NPIPB4-205ENST00000520808 GABBR2O75899 941 aa10.02□□□□□ -0.81
NPIPB4-205ENST00000520808 PROM2Q8N271 834 aa10.01□□□□□ -0.81
NPIPB4-205ENST00000520808 DCAF1Q9Y4B6 1507 aa10□□□□□ -0.81
NPIPB4-205ENST00000520808 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
NPIPB4-205ENST00000520808 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms