Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
H3F3AP84243 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H3F3AP84243 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H3F3AP84243 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
H3F3AP84243 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18■□□□□ 0.47
H3F3AP84243 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18■□□□□ 0.47
H3F3AP84243 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18■□□□□ 0.47
H3F3AP84243 AC083880.1-201ENST00000608266 535 ntBASIC18■□□□□ 0.47
H3F3AP84243 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 SMG8-203ENST00000578922 2178 ntBASIC18■□□□□ 0.47
H3F3AP84243 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18■□□□□ 0.47
H3F3AP84243 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18■□□□□ 0.47
H3F3AP84243 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
H3F3AP84243 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.99■□□□□ 0.47
H3F3AP84243 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.99■□□□□ 0.47
H3F3AP84243 AC023632.3-201ENST00000521633 145 ntBASIC17.99■□□□□ 0.47
H3F3AP84243 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.99■□□□□ 0.47
H3F3AP84243 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
H3F3AP84243 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.99■□□□□ 0.47
H3F3AP84243 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.99■□□□□ 0.47
H3F3AP84243 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
H3F3AP84243 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
H3F3AP84243 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.99■□□□□ 0.47
H3F3AP84243 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.98■□□□□ 0.47
H3F3AP84243 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.98■□□□□ 0.47
H3F3AP84243 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
H3F3AP84243 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
H3F3AP84243 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.98■□□□□ 0.47
H3F3AP84243 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
H3F3AP84243 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
H3F3AP84243 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.97■□□□□ 0.47
H3F3AP84243 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.97■□□□□ 0.47
H3F3AP84243 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
H3F3AP84243 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.97■□□□□ 0.47
H3F3AP84243 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.97■□□□□ 0.47
H3F3AP84243 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.97■□□□□ 0.47
H3F3AP84243 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.97■□□□□ 0.47
H3F3AP84243 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.97■□□□□ 0.47
H3F3AP84243 HLA-B-256ENST00000639848 1089 ntBASIC17.97■□□□□ 0.47
H3F3AP84243 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
H3F3AP84243 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.97■□□□□ 0.47
H3F3AP84243 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H3F3AP84243 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
H3F3AP84243 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.96■□□□□ 0.47
H3F3AP84243 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.96■□□□□ 0.47
H3F3AP84243 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H3F3AP84243 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H3F3AP84243 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.96■□□□□ 0.47
H3F3AP84243 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.96■□□□□ 0.47
H3F3AP84243 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
H3F3AP84243 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
H3F3AP84243 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
H3F3AP84243 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms